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Contents:

  • Installation
  • Example
    • Select Top Features
    • Create Ternary Simplex (Triangle) Plot
    • Create Binary Simplex (Ended Line) Plot
    • Create Quaternary Simplex (Tetrahedron) Plot
  • API
    • Preprocessing
      • CytoSimplex.row_normalize
      • CytoSimplex.select_top_features
    • Visualization
      • CytoSimplex.plot_binary
      • CytoSimplex.plot_ternary
      • CytoSimplex.plot_quaternary
  • Release notes
  • .rst

API

API#

To use CytoSimplex functions, import the package in Python script:

import CytoSimplex as csx
  • Preprocessing
    • CytoSimplex.row_normalize
    • CytoSimplex.select_top_features
  • Visualization
    • CytoSimplex.plot_binary
    • CytoSimplex.plot_ternary
    • CytoSimplex.plot_quaternary

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Create Quaternary Simplex (Tetrahedron) Plot

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Preprocessing

By Yichen Wang, Jialin Liu, Joshua D. Welch

© Copyright 2023, Yichen Wang, Jialin Liu, Joshua D. Welch.